Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDH1P12830 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDH1P12830 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH1P12830 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDH1P12830 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH1P12830 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDH1P12830 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDH1P12830 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH1P12830 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH1P12830 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDH1P12830 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDH1P12830 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH1P12830 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 PIN1P1-201ENST00000412108 996 ntBASIC14.88□□□□□ -0.03
CDH1P12830 GHSR-202ENST00000427970 912 ntBASIC14.88□□□□□ -0.03
CDH1P12830 AL353779.1-201ENST00000434793 351 ntBASIC14.88□□□□□ -0.03
CDH1P12830 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH1P12830 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH1P12830 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH1P12830 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH1P12830 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH1P12830 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.88□□□□□ -0.03
CDH1P12830 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDH1P12830 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH1P12830 DRD5P1-201ENST00000456605 1438 ntBASIC14.88□□□□□ -0.03
CDH1P12830 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDH1P12830 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDH1P12830 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH1P12830 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDH1P12830 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH1P12830 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH1P12830 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDH1P12830 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CDH1P12830 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH1P12830 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH1P12830 MYCLP2-201ENST00000449268 967 ntBASIC14.87□□□□□ -0.03
CDH1P12830 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.87□□□□□ -0.03
CDH1P12830 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH1P12830 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH1P12830 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH1P12830 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH1P12830 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH1P12830 BRI3BPP1-201ENST00000594224 787 ntBASIC14.87□□□□□ -0.03
CDH1P12830 AC107373.2-201ENST00000607735 490 ntBASIC14.87□□□□□ -0.03
CDH1P12830 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CDH1P12830 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH1P12830 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH1P12830 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDH1P12830 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDH1P12830 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDH1P12830 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDH1P12830 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH1P12830 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms