Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.42□□□□□ -0.26
UBCP0CG48 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
UBCP0CG48 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBCP0CG48 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBCP0CG48 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBCP0CG48 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.42□□□□□ -0.26
UBCP0CG48 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
UBCP0CG48 INTS4P1-203ENST00000641008 3683 ntBASIC13.42□□□□□ -0.26
UBCP0CG48 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBCP0CG48 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBCP0CG48 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.42□□□□□ -0.26
UBCP0CG48 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
UBCP0CG48 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.41□□□□□ -0.26
UBCP0CG48 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
UBCP0CG48 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.41□□□□□ -0.26
UBCP0CG48 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.41□□□□□ -0.26
UBCP0CG48 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
UBCP0CG48 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
UBCP0CG48 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
UBCP0CG48 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
UBCP0CG48 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.41□□□□□ -0.26
UBCP0CG48 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
UBCP0CG48 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.41□□□□□ -0.26
UBCP0CG48 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 HLA-V-204ENST00000476601 1289 ntBASIC13.41□□□□□ -0.26
UBCP0CG48 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.41□□□□□ -0.26
UBCP0CG48 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.41□□□□□ -0.26
UBCP0CG48 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.41□□□□□ -0.26
UBCP0CG48 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
UBCP0CG48 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
UBCP0CG48 AC138969.3-201ENST00000546612 1459 ntBASIC13.41□□□□□ -0.26
UBCP0CG48 AC138932.2-201ENST00000548268 1459 ntBASIC13.41□□□□□ -0.26
UBCP0CG48 AC126755.4-201ENST00000549796 1459 ntBASIC13.41□□□□□ -0.26
UBCP0CG48 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.41□□□□□ -0.26
UBCP0CG48 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.41□□□□□ -0.26
UBCP0CG48 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBCP0CG48 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
UBCP0CG48 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.4□□□□□ -0.26
UBCP0CG48 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.4□□□□□ -0.26
UBCP0CG48 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.4□□□□□ -0.26
UBCP0CG48 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.4□□□□□ -0.26
UBCP0CG48 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.4□□□□□ -0.26
UBCP0CG48 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.4□□□□□ -0.26
UBCP0CG48 RN7SL618P-201ENST00000477850 296 ntBASIC13.4□□□□□ -0.26
UBCP0CG48 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.4□□□□□ -0.26
UBCP0CG48 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
UBCP0CG48 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.4□□□□□ -0.26
UBCP0CG48 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBCP0CG48 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.4□□□□□ -0.26
UBCP0CG48 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.4□□□□□ -0.26
UBCP0CG48 AL671883.3-201ENST00000603274 991 ntBASIC13.4□□□□□ -0.26
UBCP0CG48 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms