Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.22■□□□□ 0.19
FAM228BP0C875 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.22■□□□□ 0.19
FAM228BP0C875 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FAM228BP0C875 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 AC136759.1-202ENST00000530858 2194 ntBASIC16.22■□□□□ 0.19
FAM228BP0C875 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.22■□□□□ 0.19
FAM228BP0C875 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
FAM228BP0C875 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.22■□□□□ 0.19
FAM228BP0C875 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.22■□□□□ 0.19
FAM228BP0C875 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.22■□□□□ 0.19
FAM228BP0C875 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
FAM228BP0C875 AC018665.1-201ENST00000622927 1362 ntBASIC16.22■□□□□ 0.19
FAM228BP0C875 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
FAM228BP0C875 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.22■□□□□ 0.19
FAM228BP0C875 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
FAM228BP0C875 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.22■□□□□ 0.19
FAM228BP0C875 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.22■□□□□ 0.19
FAM228BP0C875 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FAM228BP0C875 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM228BP0C875 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.21■□□□□ 0.19
FAM228BP0C875 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FAM228BP0C875 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM228BP0C875 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM228BP0C875 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
FAM228BP0C875 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM228BP0C875 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
FAM228BP0C875 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.21■□□□□ 0.19
FAM228BP0C875 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.21■□□□□ 0.19
FAM228BP0C875 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM228BP0C875 IGHV3-42-201ENST00000520410 361 ntBASIC16.21■□□□□ 0.19
FAM228BP0C875 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.21■□□□□ 0.19
FAM228BP0C875 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.21■□□□□ 0.19
FAM228BP0C875 AC107373.2-201ENST00000607735 490 ntBASIC16.21■□□□□ 0.19
FAM228BP0C875 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.21■□□□□ 0.19
FAM228BP0C875 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM228BP0C875 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
FAM228BP0C875 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FAM228BP0C875 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
FAM228BP0C875 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM228BP0C875 AL138799.1-201ENST00000448213 1675 ntBASIC16.21■□□□□ 0.18
FAM228BP0C875 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FAM228BP0C875 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
FAM228BP0C875 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
FAM228BP0C875 AL354702.1-201ENST00000442006 1960 ntBASIC16.2■□□□□ 0.18
FAM228BP0C875 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM228BP0C875 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM228BP0C875 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.2■□□□□ 0.18
FAM228BP0C875 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
FAM228BP0C875 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
FAM228BP0C875 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FAM228BP0C875 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM228BP0C875 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM228BP0C875 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.2■□□□□ 0.18
FAM228BP0C875 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
FAM228BP0C875 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.2■□□□□ 0.18
FAM228BP0C875 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
FAM228BP0C875 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
FAM228BP0C875 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.2■□□□□ 0.18
FAM228BP0C875 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.2■□□□□ 0.18
FAM228BP0C875 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.2■□□□□ 0.18
FAM228BP0C875 FAM86LP-201ENST00000478302 853 ntBASIC16.2■□□□□ 0.18
FAM228BP0C875 AC004890.2-204ENST00000481968 304 ntBASIC16.2■□□□□ 0.18
FAM228BP0C875 AC026410.3-201ENST00000514280 936 ntBASIC16.2■□□□□ 0.18
FAM228BP0C875 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.2■□□□□ 0.18
FAM228BP0C875 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
FAM228BP0C875 AC135586.1-201ENST00000539323 574 ntBASIC16.2■□□□□ 0.18
FAM228BP0C875 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms