Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.8□□□□□ -0.2
FREM3P0C091 AC022210.1-201ENST00000449856 793 ntBASIC13.8□□□□□ -0.2
FREM3P0C091 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.8□□□□□ -0.2
FREM3P0C091 AC007551.1-201ENST00000457394 519 ntBASIC13.8□□□□□ -0.2
FREM3P0C091 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.8□□□□□ -0.2
FREM3P0C091 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FREM3P0C091 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.8□□□□□ -0.2
FREM3P0C091 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.8□□□□□ -0.2
FREM3P0C091 AC073413.1-201ENST00000603927 732 ntBASIC13.8□□□□□ -0.2
FREM3P0C091 AC133552.6-201ENST00000613406 534 ntBASIC13.8□□□□□ -0.2
FREM3P0C091 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FREM3P0C091 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FREM3P0C091 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
FREM3P0C091 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FREM3P0C091 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FREM3P0C091 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
FREM3P0C091 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.8□□□□□ -0.2
FREM3P0C091 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
FREM3P0C091 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
FREM3P0C091 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 AC108725.1-201ENST00000495472 409 ntBASIC13.79□□□□□ -0.2
FREM3P0C091 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.79□□□□□ -0.2
FREM3P0C091 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.79□□□□□ -0.2
FREM3P0C091 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.79□□□□□ -0.2
FREM3P0C091 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.79□□□□□ -0.2
FREM3P0C091 BX539320.1-201ENST00000623759 877 ntBASIC13.79□□□□□ -0.2
FREM3P0C091 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.79□□□□□ -0.2
FREM3P0C091 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
FREM3P0C091 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.79□□□□□ -0.2
FREM3P0C091 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.79□□□□□ -0.2
FREM3P0C091 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.79□□□□□ -0.2
FREM3P0C091 REXO1L5P-201ENST00000622260 2098 ntBASIC13.79□□□□□ -0.2
FREM3P0C091 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.79□□□□□ -0.2
FREM3P0C091 MIR1247-201ENST00000408206 136 ntBASIC13.79□□□□□ -0.2
FREM3P0C091 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.79□□□□□ -0.2
FREM3P0C091 GHSR-202ENST00000427970 912 ntBASIC13.79□□□□□ -0.2
FREM3P0C091 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
FREM3P0C091 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
FREM3P0C091 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
FREM3P0C091 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.79□□□□□ -0.2
FREM3P0C091 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
FREM3P0C091 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
FREM3P0C091 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FREM3P0C091 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
FREM3P0C091 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FREM3P0C091 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM3P0C091 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM3P0C091 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM3P0C091 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.78□□□□□ -0.2
FREM3P0C091 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
FREM3P0C091 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FREM3P0C091 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM3P0C091 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
FREM3P0C091 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
FREM3P0C091 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
FREM3P0C091 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM3P0C091 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
FREM3P0C091 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
FREM3P0C091 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms