Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
APOBP04114 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
APOBP04114 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC9.15□□□□□ -0.94
APOBP04114 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC9.15□□□□□ -0.94
APOBP04114 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC9.15□□□□□ -0.94
APOBP04114 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
APOBP04114 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
APOBP04114 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC9.15□□□□□ -0.94
APOBP04114 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
APOBP04114 TLE1P1-201ENST00000422965 589 ntBASIC9.15□□□□□ -0.94
APOBP04114 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC9.15□□□□□ -0.94
APOBP04114 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
APOBP04114 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
APOBP04114 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC9.15□□□□□ -0.94
APOBP04114 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC9.15□□□□□ -0.94
APOBP04114 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC9.15□□□□□ -0.94
APOBP04114 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC9.15□□□□□ -0.94
APOBP04114 AP000769.1-203ENST00000637245 208 ntBASIC9.15□□□□□ -0.94
APOBP04114 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
APOBP04114 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
APOBP04114 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
APOBP04114 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC9.15□□□□□ -0.95
APOBP04114 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
APOBP04114 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
APOBP04114 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC9.15□□□□□ -0.95
APOBP04114 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC9.15□□□□□ -0.95
APOBP04114 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC9.15□□□□□ -0.95
APOBP04114 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
APOBP04114 RNLS-203ENST00000437752 525 ntTSL 2 BASIC9.15□□□□□ -0.95
APOBP04114 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC9.15□□□□□ -0.95
APOBP04114 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
APOBP04114 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC9.15□□□□□ -0.95
APOBP04114 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.95
APOBP04114 AC139713.2-207ENST00000641556 1292 ntBASIC9.15□□□□□ -0.95
APOBP04114 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC9.15□□□□□ -0.95
APOBP04114 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC9.15□□□□□ -0.95
APOBP04114 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
APOBP04114 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
APOBP04114 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
APOBP04114 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
APOBP04114 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.95
APOBP04114 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC9.14□□□□□ -0.95
APOBP04114 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 PTPA-215ENST00000432124 567 ntTSL 4 BASIC9.14□□□□□ -0.95
APOBP04114 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC9.14□□□□□ -0.95
APOBP04114 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC9.14□□□□□ -0.95
APOBP04114 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 ZNF436-AS1-201ENST00000335648 2547 ntBASIC9.14□□□□□ -0.95
APOBP04114 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
APOBP04114 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
APOBP04114 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
APOBP04114 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
APOBP04114 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC9.14□□□□□ -0.95
APOBP04114 AC083801.1-201ENST00000491689 358 ntBASIC9.14□□□□□ -0.95
APOBP04114 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 GCOM2-201ENST00000509133 1104 ntBASIC9.14□□□□□ -0.95
APOBP04114 PRMT1P1-201ENST00000604252 1009 ntBASIC9.14□□□□□ -0.95
APOBP04114 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC9.14□□□□□ -0.95
APOBP04114 AC092850.2-201ENST00000623821 2697 ntBASIC9.14□□□□□ -0.95
APOBP04114 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC9.14□□□□□ -0.95
APOBP04114 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
APOBP04114 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC9.14□□□□□ -0.95
APOBP04114 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC9.14□□□□□ -0.95
APOBP04114 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC9.14□□□□□ -0.95
APOBP04114 MED11-202ENST00000573708 802 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 AC010632.2-201ENST00000588369 1224 ntBASIC9.14□□□□□ -0.95
APOBP04114 COQ4-204ENST00000608951 781 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
APOBP04114 API5-203ENST00000455725 2257 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC9.14□□□□□ -0.95
APOBP04114 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC9.14□□□□□ -0.95
APOBP04114 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
APOBP04114 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms