Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.32□□□□□ -0.12
PDGFAP04085 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.32□□□□□ -0.12
PDGFAP04085 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.32□□□□□ -0.12
PDGFAP04085 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PDGFAP04085 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PDGFAP04085 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 AC006001.1-201ENST00000325130 474 ntBASIC14.32□□□□□ -0.12
PDGFAP04085 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.32□□□□□ -0.12
PDGFAP04085 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.32□□□□□ -0.12
PDGFAP04085 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.32□□□□□ -0.12
PDGFAP04085 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.32□□□□□ -0.12
PDGFAP04085 AC138951.2-201ENST00000623455 1161 ntBASIC14.32□□□□□ -0.12
PDGFAP04085 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.32□□□□□ -0.12
PDGFAP04085 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
PDGFAP04085 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.32□□□□□ -0.12
PDGFAP04085 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
PDGFAP04085 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
PDGFAP04085 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PDGFAP04085 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PDGFAP04085 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.32□□□□□ -0.12
PDGFAP04085 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PDGFAP04085 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDGFAP04085 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.31□□□□□ -0.12
PDGFAP04085 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PDGFAP04085 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PDGFAP04085 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.31□□□□□ -0.12
PDGFAP04085 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.31□□□□□ -0.12
PDGFAP04085 SLC25A24P2-201ENST00000415059 510 ntBASIC14.31□□□□□ -0.12
PDGFAP04085 CALR4P-201ENST00000431943 946 ntBASIC14.31□□□□□ -0.12
PDGFAP04085 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFAP04085 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 Z93015.1-201ENST00000451718 390 ntBASIC14.31□□□□□ -0.12
PDGFAP04085 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFAP04085 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 ACTG1P17-201ENST00000558391 1119 ntBASIC14.31□□□□□ -0.12
PDGFAP04085 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.31□□□□□ -0.12
PDGFAP04085 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.31□□□□□ -0.12
PDGFAP04085 AC015910.1-201ENST00000579400 975 ntBASIC14.31□□□□□ -0.12
PDGFAP04085 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFAP04085 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PDGFAP04085 AC005695.3-201ENST00000614522 232 ntBASIC14.31□□□□□ -0.12
PDGFAP04085 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.31□□□□□ -0.12
PDGFAP04085 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.31□□□□□ -0.12
PDGFAP04085 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PDGFAP04085 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFAP04085 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFAP04085 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PDGFAP04085 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.31□□□□□ -0.12
PDGFAP04085 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.31□□□□□ -0.12
PDGFAP04085 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.31□□□□□ -0.12
PDGFAP04085 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.31□□□□□ -0.12
PDGFAP04085 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDGFAP04085 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.31□□□□□ -0.12
PDGFAP04085 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PDGFAP04085 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PDGFAP04085 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFAP04085 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.3□□□□□ -0.12
PDGFAP04085 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDGFAP04085 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms