Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
MT-ND1P03886 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.43□□□□□ -0.1
MT-ND1P03886 ALG1L5P-201ENST00000482043 771 ntBASIC14.43□□□□□ -0.1
MT-ND1P03886 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 RARRES2P9-201ENST00000565168 469 ntBASIC14.43□□□□□ -0.1
MT-ND1P03886 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.43□□□□□ -0.1
MT-ND1P03886 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.43□□□□□ -0.1
MT-ND1P03886 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.43□□□□□ -0.1
MT-ND1P03886 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.43□□□□□ -0.1
MT-ND1P03886 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.43□□□□□ -0.1
MT-ND1P03886 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 AC126335.2-201ENST00000623362 4637 ntBASIC14.43□□□□□ -0.1
MT-ND1P03886 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
MT-ND1P03886 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.43□□□□□ -0.1
MT-ND1P03886 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
MT-ND1P03886 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.43□□□□□ -0.1
MT-ND1P03886 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MT-ND1P03886 AC092135.3-201ENST00000624151 1846 ntBASIC14.43□□□□□ -0.1
MT-ND1P03886 ELL2P1-201ENST00000413990 1906 ntBASIC14.43□□□□□ -0.1
MT-ND1P03886 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.43□□□□□ -0.1
MT-ND1P03886 REXO1L4P-201ENST00000605109 1937 ntBASIC14.43□□□□□ -0.1
MT-ND1P03886 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 CICP20-201ENST00000443330 2801 ntBASIC14.42□□□□□ -0.1
MT-ND1P03886 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
MT-ND1P03886 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
MT-ND1P03886 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.42□□□□□ -0.1
MT-ND1P03886 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
MT-ND1P03886 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.42□□□□□ -0.1
MT-ND1P03886 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
MT-ND1P03886 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
MT-ND1P03886 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
MT-ND1P03886 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
MT-ND1P03886 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.42□□□□□ -0.1
MT-ND1P03886 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.42□□□□□ -0.1
MT-ND1P03886 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.42□□□□□ -0.1
MT-ND1P03886 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.42□□□□□ -0.1
MT-ND1P03886 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
MT-ND1P03886 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.42□□□□□ -0.1
MT-ND1P03886 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.42□□□□□ -0.1
MT-ND1P03886 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
MT-ND1P03886 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
MT-ND1P03886 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.42□□□□□ -0.1
MT-ND1P03886 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
MT-ND1P03886 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.42□□□□□ -0.1
MT-ND1P03886 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.42□□□□□ -0.1
MT-ND1P03886 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
MT-ND1P03886 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MT-ND1P03886 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.41□□□□□ -0.1
MT-ND1P03886 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.41□□□□□ -0.1
MT-ND1P03886 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MT-ND1P03886 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MT-ND1P03886 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MT-ND1P03886 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
MT-ND1P03886 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms