Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
TIMP1P01033 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
TIMP1P01033 AC018629.1-201ENST00000623381 1736 ntBASIC16.14■□□□□ 0.17
TIMP1P01033 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TIMP1P01033 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.14■□□□□ 0.17
TIMP1P01033 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.14■□□□□ 0.17
TIMP1P01033 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
TIMP1P01033 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TIMP1P01033 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.14■□□□□ 0.17
TIMP1P01033 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.14■□□□□ 0.17
TIMP1P01033 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.14■□□□□ 0.17
TIMP1P01033 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.14■□□□□ 0.17
TIMP1P01033 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 ALG1L13P-202ENST00000519320 584 ntBASIC16.14■□□□□ 0.17
TIMP1P01033 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.14■□□□□ 0.17
TIMP1P01033 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TIMP1P01033 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.14■□□□□ 0.17
TIMP1P01033 MIR3180-2-201ENST00000581748 88 ntBASIC16.14■□□□□ 0.17
TIMP1P01033 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TIMP1P01033 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.14■□□□□ 0.17
TIMP1P01033 AL359258.3-201ENST00000622910 2331 ntBASIC16.14■□□□□ 0.17
TIMP1P01033 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TIMP1P01033 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TIMP1P01033 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TIMP1P01033 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.13■□□□□ 0.17
TIMP1P01033 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.13■□□□□ 0.17
TIMP1P01033 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TIMP1P01033 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.13■□□□□ 0.17
TIMP1P01033 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
TIMP1P01033 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.13■□□□□ 0.17
TIMP1P01033 AL354861.1-201ENST00000445213 355 ntBASIC16.13■□□□□ 0.17
TIMP1P01033 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TIMP1P01033 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.13■□□□□ 0.17
TIMP1P01033 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TIMP1P01033 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.13■□□□□ 0.17
TIMP1P01033 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.13■□□□□ 0.17
TIMP1P01033 RN7SL470P-201ENST00000583069 259 ntBASIC16.13■□□□□ 0.17
TIMP1P01033 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.13■□□□□ 0.17
TIMP1P01033 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.13■□□□□ 0.17
TIMP1P01033 LINC00431-202ENST00000636375 159 ntBASIC16.13■□□□□ 0.17
TIMP1P01033 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 ZBED1P1-201ENST00000502364 1930 ntBASIC16.13■□□□□ 0.17
TIMP1P01033 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.13■□□□□ 0.17
TIMP1P01033 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TIMP1P01033 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.13■□□□□ 0.17
TIMP1P01033 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TIMP1P01033 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.13■□□□□ 0.17
TIMP1P01033 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TIMP1P01033 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TIMP1P01033 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.12■□□□□ 0.17
TIMP1P01033 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.12■□□□□ 0.17
TIMP1P01033 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TIMP1P01033 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.12■□□□□ 0.17
TIMP1P01033 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 AL603832.2-201ENST00000566195 2125 ntBASIC16.12■□□□□ 0.17
TIMP1P01033 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TIMP1P01033 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
TIMP1P01033 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TIMP1P01033 RNA5SP359-201ENST00000364838 113 ntBASIC16.12■□□□□ 0.17
TIMP1P01033 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.12■□□□□ 0.17
TIMP1P01033 BCAS2P2-201ENST00000425064 674 ntBASIC16.12■□□□□ 0.17
TIMP1P01033 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms