Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 MARK2P16-201ENST00000605714 1723 ntBASIC17.05■□□□□ 0.32
ALDH1A1P00352 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 FAM86KP-201ENST00000509817 987 ntBASIC17.05■□□□□ 0.32
ALDH1A1P00352 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 AL118516.1-201ENST00000564152 670 ntBASIC17.05■□□□□ 0.32
ALDH1A1P00352 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 AC006158.1-201ENST00000610661 249 ntBASIC17.05■□□□□ 0.32
ALDH1A1P00352 AC018695.6-201ENST00000614011 534 ntBASIC17.05■□□□□ 0.32
ALDH1A1P00352 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 TNRC18P3-201ENST00000441896 2691 ntBASIC17.05■□□□□ 0.32
ALDH1A1P00352 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.05■□□□□ 0.32
ALDH1A1P00352 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ALDH1A1P00352 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALDH1A1P00352 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ALDH1A1P00352 AHCYP4-201ENST00000419201 1315 ntBASIC17.04■□□□□ 0.32
ALDH1A1P00352 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ALDH1A1P00352 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALDH1A1P00352 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALDH1A1P00352 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ALDH1A1P00352 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALDH1A1P00352 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 DDX39AP1-201ENST00000445147 1181 ntBASIC17.04■□□□□ 0.32
ALDH1A1P00352 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.04■□□□□ 0.32
ALDH1A1P00352 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALDH1A1P00352 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALDH1A1P00352 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALDH1A1P00352 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALDH1A1P00352 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALDH1A1P00352 RNA5SP359-201ENST00000364838 113 ntBASIC17.03■□□□□ 0.32
ALDH1A1P00352 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.03■□□□□ 0.32
ALDH1A1P00352 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALDH1A1P00352 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 LINC00634-202ENST00000505157 222 ntBASIC17.03■□□□□ 0.32
ALDH1A1P00352 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 AC002472.4-201ENST00000641915 272 ntBASIC17.03■□□□□ 0.32
ALDH1A1P00352 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALDH1A1P00352 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALDH1A1P00352 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALDH1A1P00352 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALDH1A1P00352 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALDH1A1P00352 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALDH1A1P00352 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALDH1A1P00352 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ALDH1A1P00352 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms