Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
BEST1O76090 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST1O76090 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
BEST1O76090 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
BEST1O76090 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.9■□□□□ 0.14
BEST1O76090 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BEST1O76090 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
BEST1O76090 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
BEST1O76090 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 AL354989.2-201ENST00000435838 1540 ntBASIC15.89■□□□□ 0.13
BEST1O76090 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
BEST1O76090 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 AJ011931.1-201ENST00000618749 2492 ntBASIC15.89■□□□□ 0.13
BEST1O76090 AC020910.5-201ENST00000623668 1865 ntBASIC15.89■□□□□ 0.13
BEST1O76090 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.89■□□□□ 0.13
BEST1O76090 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
BEST1O76090 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.89■□□□□ 0.13
BEST1O76090 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
BEST1O76090 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
BEST1O76090 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.89■□□□□ 0.13
BEST1O76090 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.89■□□□□ 0.13
BEST1O76090 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.89■□□□□ 0.13
BEST1O76090 FAM8A4P-201ENST00000435433 1213 ntBASIC15.89■□□□□ 0.13
BEST1O76090 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.89■□□□□ 0.13
BEST1O76090 OR10B1P-201ENST00000601666 907 ntBASIC15.89■□□□□ 0.13
BEST1O76090 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.89■□□□□ 0.13
BEST1O76090 AC009542.2-202ENST00000619004 1067 ntBASIC15.89■□□□□ 0.13
BEST1O76090 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
BEST1O76090 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BEST1O76090 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.88■□□□□ 0.13
BEST1O76090 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.88■□□□□ 0.13
BEST1O76090 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
BEST1O76090 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
BEST1O76090 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
BEST1O76090 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.88■□□□□ 0.13
BEST1O76090 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 RNA5SP412-201ENST00000516234 123 ntBASIC15.88■□□□□ 0.13
BEST1O76090 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.88■□□□□ 0.13
BEST1O76090 C2orf69P2-201ENST00000562032 1123 ntBASIC15.88■□□□□ 0.13
BEST1O76090 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.88■□□□□ 0.13
BEST1O76090 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.88■□□□□ 0.13
BEST1O76090 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
BEST1O76090 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
BEST1O76090 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
BEST1O76090 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.88■□□□□ 0.13
BEST1O76090 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.88■□□□□ 0.13
BEST1O76090 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.88■□□□□ 0.13
BEST1O76090 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
BEST1O76090 REXO1L6P-201ENST00000603433 1515 ntBASIC15.88■□□□□ 0.13
BEST1O76090 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.88■□□□□ 0.13
BEST1O76090 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
BEST1O76090 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
BEST1O76090 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BEST1O76090 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms