Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM3O75382 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM3O75382 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRIM3O75382 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM3O75382 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRIM3O75382 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM3O75382 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM3O75382 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM3O75382 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM3O75382 RN7SL752P-201ENST00000463779 287 ntBASIC14.27□□□□□ -0.13
TRIM3O75382 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM3O75382 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM3O75382 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM3O75382 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRIM3O75382 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM3O75382 BRI3BPP1-201ENST00000594224 787 ntBASIC14.27□□□□□ -0.13
TRIM3O75382 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRIM3O75382 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM3O75382 WFDC1-204ENST00000613603 549 ntBASIC14.27□□□□□ -0.13
TRIM3O75382 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM3O75382 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM3O75382 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM3O75382 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM3O75382 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM3O75382 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM3O75382 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRIM3O75382 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TRIM3O75382 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM3O75382 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM3O75382 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TRIM3O75382 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRIM3O75382 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRIM3O75382 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM3O75382 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM3O75382 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM3O75382 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.26□□□□□ -0.13
TRIM3O75382 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 AL442647.2-201ENST00000429864 857 ntBASIC14.26□□□□□ -0.13
TRIM3O75382 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM3O75382 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.26□□□□□ -0.13
TRIM3O75382 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.26□□□□□ -0.13
TRIM3O75382 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM3O75382 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM3O75382 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 AC015910.1-201ENST00000579400 975 ntBASIC14.26□□□□□ -0.13
TRIM3O75382 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM3O75382 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 AC239800.4-201ENST00000603712 296 ntBASIC14.26□□□□□ -0.13
TRIM3O75382 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRIM3O75382 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM3O75382 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM3O75382 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM3O75382 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM3O75382 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM3O75382 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.26□□□□□ -0.13
TRIM3O75382 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM3O75382 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM3O75382 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM3O75382 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM3O75382 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM3O75382 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM3O75382 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM3O75382 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM3O75382 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM3O75382 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM3O75382 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.25□□□□□ -0.13
TRIM3O75382 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM3O75382 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.25□□□□□ -0.13
TRIM3O75382 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRIM3O75382 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRIM3O75382 AC139749.1-202ENST00000617529 3139 ntBASIC14.25□□□□□ -0.13
TRIM3O75382 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRIM3O75382 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms