Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCN2BO60939 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SCN2BO60939 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SCN2BO60939 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN2BO60939 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN2BO60939 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.46□□□□□ -0.09
SCN2BO60939 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN2BO60939 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SCN2BO60939 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
SCN2BO60939 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.46□□□□□ -0.09
SCN2BO60939 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.46□□□□□ -0.09
SCN2BO60939 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SCN2BO60939 AC004449.1-201ENST00000564240 433 ntBASIC14.46□□□□□ -0.09
SCN2BO60939 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.46□□□□□ -0.09
SCN2BO60939 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.46□□□□□ -0.09
SCN2BO60939 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SCN2BO60939 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN2BO60939 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN2BO60939 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SCN2BO60939 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SCN2BO60939 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SCN2BO60939 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SCN2BO60939 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SCN2BO60939 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.46□□□□□ -0.1
SCN2BO60939 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SCN2BO60939 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.46□□□□□ -0.1
SCN2BO60939 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.45□□□□□ -0.1
SCN2BO60939 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.45□□□□□ -0.1
SCN2BO60939 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 AL157414.3-201ENST00000624276 1954 ntBASIC14.45□□□□□ -0.1
SCN2BO60939 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.45□□□□□ -0.1
SCN2BO60939 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SCN2BO60939 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
SCN2BO60939 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.45□□□□□ -0.1
SCN2BO60939 TREML5P-201ENST00000421694 576 ntBASIC14.45□□□□□ -0.1
SCN2BO60939 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.45□□□□□ -0.1
SCN2BO60939 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
SCN2BO60939 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.45□□□□□ -0.1
SCN2BO60939 AL589987.1-201ENST00000453380 819 ntBASIC14.45□□□□□ -0.1
SCN2BO60939 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.45□□□□□ -0.1
SCN2BO60939 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
SCN2BO60939 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SCN2BO60939 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.45□□□□□ -0.1
SCN2BO60939 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
SCN2BO60939 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SCN2BO60939 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.44□□□□□ -0.1
SCN2BO60939 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 CLK3P2-201ENST00000427566 1453 ntBASIC14.44□□□□□ -0.1
SCN2BO60939 BTBD7P1-201ENST00000447253 1453 ntBASIC14.44□□□□□ -0.1
SCN2BO60939 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.44□□□□□ -0.1
SCN2BO60939 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.44□□□□□ -0.1
SCN2BO60939 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.44□□□□□ -0.1
SCN2BO60939 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.44□□□□□ -0.1
SCN2BO60939 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.44□□□□□ -0.1
SCN2BO60939 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.44□□□□□ -0.1
SCN2BO60939 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.44□□□□□ -0.1
SCN2BO60939 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SCN2BO60939 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.44□□□□□ -0.1
SCN2BO60939 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.44□□□□□ -0.1
SCN2BO60939 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.44□□□□□ -0.1
SCN2BO60939 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms