Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.56□□□□□ -0.08
LCMT2O60294 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 KRT8P35-201ENST00000483942 1338 ntBASIC14.56□□□□□ -0.08
LCMT2O60294 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.56□□□□□ -0.08
LCMT2O60294 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LCMT2O60294 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.56□□□□□ -0.08
LCMT2O60294 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 AC126755.1-201ENST00000525846 6405 ntBASIC14.56□□□□□ -0.08
LCMT2O60294 NORAD-201ENST00000565493 5339 ntBASIC14.56□□□□□ -0.08
LCMT2O60294 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.56□□□□□ -0.08
LCMT2O60294 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.56□□□□□ -0.08
LCMT2O60294 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LCMT2O60294 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LCMT2O60294 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.55□□□□□ -0.08
LCMT2O60294 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LCMT2O60294 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.55□□□□□ -0.08
LCMT2O60294 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 ACTBP8-201ENST00000403258 1108 ntBASIC14.55□□□□□ -0.08
LCMT2O60294 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LCMT2O60294 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 GAPDHP21-201ENST00000450301 1010 ntBASIC14.55□□□□□ -0.08
LCMT2O60294 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.55□□□□□ -0.08
LCMT2O60294 GIMAP3P-201ENST00000495150 836 ntBASIC14.55□□□□□ -0.08
LCMT2O60294 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.55□□□□□ -0.08
LCMT2O60294 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 KRT18P25-201ENST00000508931 1278 ntBASIC14.55□□□□□ -0.08
LCMT2O60294 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.55□□□□□ -0.08
LCMT2O60294 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.55□□□□□ -0.08
LCMT2O60294 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LCMT2O60294 AC145423.3-201ENST00000615987 467 ntBASIC14.55□□□□□ -0.08
LCMT2O60294 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LCMT2O60294 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
LCMT2O60294 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.55□□□□□ -0.08
LCMT2O60294 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LCMT2O60294 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.55□□□□□ -0.08
LCMT2O60294 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LCMT2O60294 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LCMT2O60294 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.55□□□□□ -0.08
LCMT2O60294 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.54□□□□□ -0.08
LCMT2O60294 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LCMT2O60294 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.54□□□□□ -0.08
LCMT2O60294 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LCMT2O60294 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.54□□□□□ -0.08
LCMT2O60294 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
LCMT2O60294 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LCMT2O60294 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.54□□□□□ -0.08
LCMT2O60294 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.54□□□□□ -0.08
LCMT2O60294 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.54□□□□□ -0.08
LCMT2O60294 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.54□□□□□ -0.08
LCMT2O60294 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.54□□□□□ -0.08
LCMT2O60294 KRT17P7-201ENST00000451704 1104 ntBASIC14.54□□□□□ -0.08
LCMT2O60294 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.54□□□□□ -0.08
LCMT2O60294 AC022616.1-201ENST00000518688 554 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms