Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
DCXO43602 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DCXO43602 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DCXO43602 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DCXO43602 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
DCXO43602 PPT1-215ENST00000641471 2368 ntBASIC16.11■□□□□ 0.17
DCXO43602 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
DCXO43602 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
DCXO43602 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 PCGF3-213ENST00000620529 1899 ntBASIC16.1■□□□□ 0.17
DCXO43602 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.1■□□□□ 0.17
DCXO43602 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.1■□□□□ 0.17
DCXO43602 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.1■□□□□ 0.17
DCXO43602 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.1■□□□□ 0.17
DCXO43602 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.1■□□□□ 0.17
DCXO43602 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.1■□□□□ 0.17
DCXO43602 AC026410.3-201ENST00000514280 936 ntBASIC16.1■□□□□ 0.17
DCXO43602 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.1■□□□□ 0.17
DCXO43602 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.1■□□□□ 0.17
DCXO43602 RN7SL774P-201ENST00000577467 290 ntBASIC16.1■□□□□ 0.17
DCXO43602 RN7SL574P-201ENST00000581512 297 ntBASIC16.1■□□□□ 0.17
DCXO43602 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.1■□□□□ 0.17
DCXO43602 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.1■□□□□ 0.17
DCXO43602 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.1■□□□□ 0.17
DCXO43602 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.1■□□□□ 0.17
DCXO43602 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.1■□□□□ 0.17
DCXO43602 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.1■□□□□ 0.17
DCXO43602 AC011491.1-203ENST00000637688 543 ntBASIC16.1■□□□□ 0.17
DCXO43602 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
DCXO43602 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.1■□□□□ 0.17
DCXO43602 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
DCXO43602 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 TUBBP5-203ENST00000508529 1334 ntBASIC16.1■□□□□ 0.17
DCXO43602 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
DCXO43602 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.1■□□□□ 0.17
DCXO43602 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
DCXO43602 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.1■□□□□ 0.17
DCXO43602 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.09■□□□□ 0.17
DCXO43602 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.09■□□□□ 0.17
DCXO43602 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
DCXO43602 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.09■□□□□ 0.17
DCXO43602 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.09■□□□□ 0.17
DCXO43602 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.09■□□□□ 0.17
DCXO43602 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.09■□□□□ 0.17
DCXO43602 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.09■□□□□ 0.17
DCXO43602 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.09■□□□□ 0.17
DCXO43602 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 NUP210P1-202ENST00000504322 710 ntBASIC16.09■□□□□ 0.17
DCXO43602 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.09■□□□□ 0.17
DCXO43602 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
DCXO43602 AL691432.1-201ENST00000596308 1422 ntBASIC16.09■□□□□ 0.17
DCXO43602 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
DCXO43602 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DCXO43602 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.09■□□□□ 0.17
DCXO43602 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.09■□□□□ 0.17
DCXO43602 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DCXO43602 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms