Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN6O15212 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN6O15212 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
PFDN6O15212 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN6O15212 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN6O15212 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PFDN6O15212 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PFDN6O15212 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.31■□□□□ 0.04
PFDN6O15212 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.31■□□□□ 0.04
PFDN6O15212 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN6O15212 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN6O15212 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN6O15212 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PFDN6O15212 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN6O15212 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.31■□□□□ 0.04
PFDN6O15212 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN6O15212 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.31■□□□□ 0.04
PFDN6O15212 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.31■□□□□ 0.04
PFDN6O15212 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.31■□□□□ 0.04
PFDN6O15212 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
PFDN6O15212 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PFDN6O15212 SNX18-202ENST00000343017 3140 ntBASIC15.3■□□□□ 0.04
PFDN6O15212 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.3■□□□□ 0.04
PFDN6O15212 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
PFDN6O15212 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.3■□□□□ 0.04
PFDN6O15212 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.3■□□□□ 0.04
PFDN6O15212 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.3■□□□□ 0.04
PFDN6O15212 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 AL645937.2-201ENST00000396808 931 ntBASIC15.3■□□□□ 0.04
PFDN6O15212 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PFDN6O15212 CYMP-203ENST00000474680 1263 ntBASIC15.3■□□□□ 0.04
PFDN6O15212 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.3■□□□□ 0.04
PFDN6O15212 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.3■□□□□ 0.04
PFDN6O15212 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.3■□□□□ 0.04
PFDN6O15212 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PFDN6O15212 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.3■□□□□ 0.04
PFDN6O15212 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PFDN6O15212 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.3■□□□□ 0.04
PFDN6O15212 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
PFDN6O15212 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.3■□□□□ 0.04
PFDN6O15212 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.3■□□□□ 0.04
PFDN6O15212 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.3■□□□□ 0.04
PFDN6O15212 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
PFDN6O15212 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PFDN6O15212 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.29■□□□□ 0.04
PFDN6O15212 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
PFDN6O15212 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 SPDYE19P-201ENST00000338590 713 ntBASIC15.29■□□□□ 0.04
PFDN6O15212 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PFDN6O15212 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.29■□□□□ 0.04
PFDN6O15212 NUS1P3-201ENST00000423502 862 ntBASIC15.29■□□□□ 0.04
PFDN6O15212 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.29■□□□□ 0.04
PFDN6O15212 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.29■□□□□ 0.04
PFDN6O15212 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.29■□□□□ 0.04
PFDN6O15212 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.29■□□□□ 0.04
PFDN6O15212 RN7SL399P-201ENST00000471648 279 ntBASIC15.29■□□□□ 0.04
PFDN6O15212 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.29■□□□□ 0.04
PFDN6O15212 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.29■□□□□ 0.04
PFDN6O15212 AC005498.2-205ENST00000593218 784 ntBASIC15.29■□□□□ 0.04
PFDN6O15212 AL390955.2-201ENST00000603032 514 ntBASIC15.29■□□□□ 0.04
PFDN6O15212 AC093813.1-201ENST00000605066 256 ntBASIC15.29■□□□□ 0.04
PFDN6O15212 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PFDN6O15212 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 REXO1L2P-201ENST00000425429 2069 ntBASIC15.29■□□□□ 0.04
PFDN6O15212 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.29■□□□□ 0.04
PFDN6O15212 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PFDN6O15212 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms