Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD1O14646 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD1O14646 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD1O14646 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC23.63■■□□□ 1.37
CHD1O14646 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC23.63■■□□□ 1.37
CHD1O14646 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC23.63■■□□□ 1.37
CHD1O14646 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC23.63■■□□□ 1.37
CHD1O14646 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD1O14646 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHD1O14646 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CHD1O14646 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD1O14646 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD1O14646 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD1O14646 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD1O14646 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC23.63■■□□□ 1.37
CHD1O14646 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1O14646 AC018470.1-201ENST00000624790 3129 ntBASIC23.62■■□□□ 1.37
CHD1O14646 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC23.62■■□□□ 1.37
CHD1O14646 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1O14646 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC23.62■■□□□ 1.37
CHD1O14646 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CHD1O14646 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1O14646 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1O14646 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC23.62■■□□□ 1.37
CHD1O14646 AC087203.1-201ENST00000532111 1181 ntBASIC23.62■■□□□ 1.37
CHD1O14646 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC23.62■■□□□ 1.37
CHD1O14646 PHF23-213ENST00000613632 850 ntTSL 5 BASIC23.62■■□□□ 1.37
CHD1O14646 AL512324.3-201ENST00000619383 882 ntBASIC23.62■■□□□ 1.37
CHD1O14646 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC23.62■■□□□ 1.37
CHD1O14646 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1O14646 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1O14646 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CHD1O14646 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1O14646 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC23.62■■□□□ 1.37
CHD1O14646 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1O14646 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CHD1O14646 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1O14646 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC23.62■■□□□ 1.37
CHD1O14646 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC23.62■■□□□ 1.37
CHD1O14646 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC23.62■■□□□ 1.37
CHD1O14646 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC23.62■■□□□ 1.37
CHD1O14646 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC23.62■■□□□ 1.37
CHD1O14646 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1O14646 TYMSP2-201ENST00000589501 424 ntBASIC23.62■■□□□ 1.37
CHD1O14646 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC23.62■■□□□ 1.37
CHD1O14646 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC23.61■■□□□ 1.37
CHD1O14646 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
CHD1O14646 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1O14646 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CHD1O14646 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CHD1O14646 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1O14646 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1O14646 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
CHD1O14646 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
CHD1O14646 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC23.61■■□□□ 1.37
CHD1O14646 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC23.61■■□□□ 1.37
CHD1O14646 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC23.61■■□□□ 1.37
CHD1O14646 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1O14646 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC23.61■■□□□ 1.37
CHD1O14646 AL357143.1-203ENST00000639750 881 ntBASIC23.61■■□□□ 1.37
CHD1O14646 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CHD1O14646 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1O14646 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC23.61■■□□□ 1.37
CHD1O14646 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC23.61■■□□□ 1.37
CHD1O14646 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
CHD1O14646 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1O14646 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC23.6■■□□□ 1.37
CHD1O14646 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1O14646 HINT1-205ENST00000508488 703 ntTSL 2 BASIC23.6■■□□□ 1.37
CHD1O14646 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC23.6■■□□□ 1.37
CHD1O14646 AC120498.7-201ENST00000562876 330 ntBASIC23.6■■□□□ 1.37
CHD1O14646 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
CHD1O14646 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1O14646 AL365181.1-201ENST00000564032 1828 ntBASIC23.6■■□□□ 1.37
CHD1O14646 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1O14646 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1O14646 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1O14646 AGGF1P2-201ENST00000426656 2106 ntBASIC23.6■■□□□ 1.37
CHD1O14646 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1O14646 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1O14646 AC009093.10-201ENST00000641956 1442 ntBASIC23.6■■□□□ 1.37
CHD1O14646 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1O14646 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC23.6■■□□□ 1.37
CHD1O14646 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC23.6■■□□□ 1.37
CHD1O14646 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CHD1O14646 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC23.59■■□□□ 1.37
CHD1O14646 AL080243.1-201ENST00000423293 1060 ntBASIC23.59■■□□□ 1.37
CHD1O14646 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
CHD1O14646 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD1O14646 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1O14646 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1O14646 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1O14646 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1O14646 AC008536.3-201ENST00000623282 1599 ntBASIC23.59■■□□□ 1.37
CHD1O14646 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1O14646 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC23.59■■□□□ 1.37
CHD1O14646 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1O14646 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
CHD1O14646 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC23.59■■□□□ 1.37
CHD1O14646 SRP14-208ENST00000560773 468 ntTSL 3 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms