Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SOX1O00570 CASP2-203ENST00000392925 616 ntTSL 3 BASIC15.88■□□□□ 0.13
SOX1O00570 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC15.88■□□□□ 0.13
SOX1O00570 RPL3P5-201ENST00000441645 1232 ntBASIC15.88■□□□□ 0.13
SOX1O00570 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC15.88■□□□□ 0.13
SOX1O00570 AC092612.1-201ENST00000514501 998 ntBASIC15.88■□□□□ 0.13
SOX1O00570 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SOX1O00570 AC226150.1-201ENST00000544259 466 ntBASIC15.88■□□□□ 0.13
SOX1O00570 AC142086.5-202ENST00000562500 217 ntBASIC15.88■□□□□ 0.13
SOX1O00570 HCG18-241ENST00000602290 821 ntTSL 2 BASIC15.88■□□□□ 0.13
SOX1O00570 AC140113.1-201ENST00000603467 169 ntBASIC15.88■□□□□ 0.13
SOX1O00570 AC254633.1-201ENST00000606790 345 ntBASIC15.88■□□□□ 0.13
SOX1O00570 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC15.88■□□□□ 0.13
SOX1O00570 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SOX1O00570 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SOX1O00570 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SOX1O00570 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SOX1O00570 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SOX1O00570 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX1O00570 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 OLA1P2-201ENST00000395519 1264 ntBASIC15.87■□□□□ 0.13
SOX1O00570 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SOX1O00570 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SOX1O00570 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX1O00570 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX1O00570 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC15.87■□□□□ 0.13
SOX1O00570 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.87■□□□□ 0.13
SOX1O00570 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.87■□□□□ 0.13
SOX1O00570 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SOX1O00570 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SOX1O00570 AC008825.2-201ENST00000603374 718 ntBASIC15.87■□□□□ 0.13
SOX1O00570 AC010976.2-201ENST00000609697 852 ntBASIC15.87■□□□□ 0.13
SOX1O00570 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SOX1O00570 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
SOX1O00570 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.87■□□□□ 0.13
SOX1O00570 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SOX1O00570 PP12613-201ENST00000424958 2230 ntBASIC15.87■□□□□ 0.13
SOX1O00570 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SOX1O00570 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.87■□□□□ 0.13
SOX1O00570 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX1O00570 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC15.86■□□□□ 0.13
SOX1O00570 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SOX1O00570 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX1O00570 AL157407.1-201ENST00000435784 904 ntBASIC15.86■□□□□ 0.13
SOX1O00570 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 HIST1H2APS2-201ENST00000454426 370 ntBASIC15.86■□□□□ 0.13
SOX1O00570 CASP3-205ENST00000517513 964 ntTSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.86■□□□□ 0.13
SOX1O00570 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 348.3 ms