Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 SPDYE19P-201ENST00000338590 713 ntBASIC14.43□□□□□ -0.1
UPK1AO00322 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 AC104457.1-201ENST00000401024 814 ntBASIC14.43□□□□□ -0.1
UPK1AO00322 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK1AO00322 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK1AO00322 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK1AO00322 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1AO00322 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.43□□□□□ -0.1
UPK1AO00322 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1AO00322 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1AO00322 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.43□□□□□ -0.1
UPK1AO00322 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
UPK1AO00322 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK1AO00322 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.43□□□□□ -0.1
UPK1AO00322 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
UPK1AO00322 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
UPK1AO00322 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1AO00322 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
UPK1AO00322 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK1AO00322 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK1AO00322 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK1AO00322 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1AO00322 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
UPK1AO00322 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK1AO00322 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
UPK1AO00322 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
UPK1AO00322 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK1AO00322 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.42□□□□□ -0.1
UPK1AO00322 AC079781.5-202ENST00000641784 3743 ntBASIC14.42□□□□□ -0.1
UPK1AO00322 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK1AO00322 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 AC068587.6-202ENST00000641839 5619 ntBASIC14.42□□□□□ -0.1
UPK1AO00322 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UPK1AO00322 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
UPK1AO00322 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK1AO00322 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK1AO00322 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.42□□□□□ -0.1
UPK1AO00322 GNAQP1-201ENST00000444815 1067 ntBASIC14.42□□□□□ -0.1
UPK1AO00322 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK1AO00322 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
UPK1AO00322 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.42□□□□□ -0.1
UPK1AO00322 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UPK1AO00322 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UPK1AO00322 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UPK1AO00322 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
UPK1AO00322 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK1AO00322 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
UPK1AO00322 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.42□□□□□ -0.1
UPK1AO00322 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK1AO00322 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1AO00322 AC005252.3-201ENST00000623855 2258 ntBASIC14.41□□□□□ -0.1
UPK1AO00322 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK1AO00322 AC015802.1-201ENST00000588104 1449 ntBASIC14.41□□□□□ -0.1
UPK1AO00322 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.41□□□□□ -0.1
UPK1AO00322 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UPK1AO00322 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
UPK1AO00322 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1AO00322 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK1AO00322 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
UPK1AO00322 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms