Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCDC188H7C350 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CCDC188H7C350 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC188H7C350 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC188H7C350 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.85■□□□□ 0.13
CCDC188H7C350 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC188H7C350 AL033527.5-202ENST00000641632 1098 ntBASIC15.85■□□□□ 0.13
CCDC188H7C350 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCDC188H7C350 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCDC188H7C350 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCDC188H7C350 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC188H7C350 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC188H7C350 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC188H7C350 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCDC188H7C350 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC188H7C350 AC023090.2-201ENST00000625182 2110 ntBASIC15.85■□□□□ 0.13
CCDC188H7C350 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC188H7C350 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCDC188H7C350 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC188H7C350 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC188H7C350 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC188H7C350 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCDC188H7C350 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC188H7C350 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC188H7C350 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC188H7C350 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CCDC188H7C350 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 AC004832.2-201ENST00000426397 482 ntBASIC15.84■□□□□ 0.13
CCDC188H7C350 SPDYE14P-201ENST00000442619 822 ntBASIC15.84■□□□□ 0.13
CCDC188H7C350 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC188H7C350 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.84■□□□□ 0.13
CCDC188H7C350 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC188H7C350 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC188H7C350 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC188H7C350 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC188H7C350 AC074044.1-201ENST00000609673 707 ntBASIC15.84■□□□□ 0.13
CCDC188H7C350 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCDC188H7C350 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC188H7C350 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCDC188H7C350 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCDC188H7C350 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC188H7C350 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC188H7C350 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.83■□□□□ 0.13
CCDC188H7C350 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.83■□□□□ 0.13
CCDC188H7C350 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC188H7C350 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC188H7C350 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC188H7C350 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC188H7C350 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.83■□□□□ 0.13
CCDC188H7C350 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC188H7C350 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CCDC188H7C350 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CCDC188H7C350 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC188H7C350 AL627223.1-201ENST00000416693 442 ntBASIC15.83■□□□□ 0.12
CCDC188H7C350 AL080243.2-201ENST00000418783 582 ntBASIC15.83■□□□□ 0.12
CCDC188H7C350 GPS2P2-201ENST00000430745 888 ntBASIC15.83■□□□□ 0.12
CCDC188H7C350 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC188H7C350 RBPMS2P1-201ENST00000437762 623 ntBASIC15.83■□□□□ 0.12
CCDC188H7C350 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC188H7C350 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC188H7C350 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 AC004066.1-201ENST00000502488 802 ntBASIC15.83■□□□□ 0.12
CCDC188H7C350 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.83■□□□□ 0.12
CCDC188H7C350 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC188H7C350 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC188H7C350 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC188H7C350 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC188H7C350 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CCDC188H7C350 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC188H7C350 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC188H7C350 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC188H7C350 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms