Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM88BA6NKF7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM88BA6NKF7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
TMEM88BA6NKF7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM88BA6NKF7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.27■□□□□ 0.35
TMEM88BA6NKF7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM88BA6NKF7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TMEM88BA6NKF7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM88BA6NKF7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TMEM88BA6NKF7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM88BA6NKF7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM88BA6NKF7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TMEM88BA6NKF7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 PKD1P1-201ENST00000458669 6805 ntBASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 RPL5P21-201ENST00000404620 815 ntBASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 AC092580.1-201ENST00000433998 658 ntBASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 RPL3P5-201ENST00000441645 1232 ntBASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 RPL18AP8-201ENST00000486071 528 ntBASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 RN7SL121P-201ENST00000584223 273 ntBASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 AL118522.1-201ENST00000611368 560 ntBASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 AC124067.4-201ENST00000519691 2379 ntBASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM88BA6NKF7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 AC108734.2-201ENST00000420887 1069 ntBASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 AL929302.1-201ENST00000426556 871 ntBASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 CHCHD2P2-201ENST00000503744 321 ntBASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 AL353622.2-201ENST00000605846 425 ntBASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 BX088702.1-201ENST00000610784 235 ntBASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 AC011462.4-201ENST00000616866 449 ntBASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM88BA6NKF7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM88BA6NKF7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms