Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 AC087481.3-201ENST00000602886 1894 ntBASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 MST1L-201ENST00000442552 2185 ntBASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 DUX4L47-201ENST00000566374 394 ntBASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 AC004466.1-201ENST00000599515 1080 ntBASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 ZACNP1-201ENST00000612259 710 ntBASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 AL359258.3-201ENST00000622910 2331 ntBASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TBC1D3FA6NER0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 AC004898.1-201ENST00000451057 766 ntBASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 AC106820.3-201ENST00000561653 397 ntBASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 AC073413.1-201ENST00000603927 732 ntBASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 AC138466.3-201ENST00000619983 221 ntBASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 AC244452.3-201ENST00000636814 210 ntBASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 CLUHP2-201ENST00000426660 1303 ntBASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.1■□□□□ 0.01
TBC1D3FA6NER0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms