Protein–RNA interactions for Protein: Q9Y4D8

HECTD4, Probable E3 ubiquitin-protein ligase HECTD4, humanhuman

Predictions only

Length 3,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4Q9Y4D8 TREHP1-201ENST00000531328 465 ntBASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 RN7SL470P-201ENST00000583069 259 ntBASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 HCG18-241ENST00000602290 821 ntTSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AC244394.1-201ENST00000435000 1665 ntBASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AL360270.3-201ENST00000609118 1348 ntBASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 ORAOV1P1-201ENST00000503108 395 ntBASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AP005117.1-202ENST00000581724 1908 ntBASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 LILRP1-201ENST00000444199 1370 ntBASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AC106827.1-201ENST00000366454 431 ntBASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 RN7SKP109-201ENST00000410592 316 ntBASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AC063952.3-201ENST00000467756 308 ntBASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AC011462.4-201ENST00000616866 449 ntBASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC9.72□□□□□ -0.85
HECTD4Q9Y4D8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 AC025183.3-201ENST00000623526 1482 ntBASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 ELP5-212ENST00000574255 671 ntTSL 2 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
HECTD4Q9Y4D8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 RPL14-203ENST00000416518 812 ntTSL 3 BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
HECTD4Q9Y4D8 HNRNPA1P36-201ENST00000521313 955 ntBASIC9.71□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms