Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 AC018665.1-201ENST00000622927 1362 ntBASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 AC134312.5-201ENST00000568031 1313 ntBASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 RN7SL692P-201ENST00000464677 288 ntBASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 AP005018.1-201ENST00000525475 301 ntBASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 AC068587.3-201ENST00000526613 355 ntBASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 AL358472.5-202ENST00000641448 1267 ntBASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 LINC02228-204ENST00000642115 2962 ntBASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGC3Q9UN70 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGC3Q9UN70 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 FAM45BP-202ENST00000592932 1624 ntBASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 AC106881.1-201ENST00000605849 3329 ntBASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 AP002414.2-201ENST00000591780 3365 ntBASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 AC007389.4-201ENST00000454674 793 ntBASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 TDH-203ENST00000531764 1110 ntBASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 AC060766.1-201ENST00000590824 627 ntBASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 AC007292.2-201ENST00000593524 1812 ntBASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGC3Q9UN70 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGC3Q9UN70 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms