Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 MIR663B-201ENST00000408361 115 ntBASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 RPL13AP20-201ENST00000459725 609 ntBASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 MIR4741-201ENST00000579822 90 ntBASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPC1L1Q9UHC9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 AC139712.1-201ENST00000378256 1875 ntBASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 MTX1P1-201ENST00000440904 838 ntBASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 TPT1P11-201ENST00000458482 498 ntBASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 DERL2-202ENST00000570848 657 ntTSL 5 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPC1L1Q9UHC9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 KRT8P28-201ENST00000433288 1390 ntBASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 MIR1908-201ENST00000410394 80 ntBASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 MIR6799-201ENST00000620297 69 ntBASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 MVK-217ENST00000639206 367 ntTSL 5 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 MTHFR-210ENST00000641407 2387 ntBASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 LINC00554-201ENST00000564841 3011 ntBASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPC1L1Q9UHC9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 AC005695.3-201ENST00000614522 232 ntBASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms