Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 RN7SL396P-201ENST00000471086 295 ntBASIC13.91□□□□□ -0.18
DKK4Q9UBT3 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 MIR3180-2-201ENST00000581748 88 ntBASIC13.91□□□□□ -0.18
DKK4Q9UBT3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 AL451007.2-201ENST00000632004 563 ntBASIC13.91□□□□□ -0.18
DKK4Q9UBT3 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 FAM90A21P-201ENST00000510875 1396 ntBASIC13.91□□□□□ -0.18
DKK4Q9UBT3 FAM90A15P-201ENST00000514465 1395 ntBASIC13.91□□□□□ -0.18
DKK4Q9UBT3 FAM90A6P-201ENST00000515148 1394 ntBASIC13.91□□□□□ -0.18
DKK4Q9UBT3 FAM90A16P-201ENST00000526662 1395 ntBASIC13.91□□□□□ -0.18
DKK4Q9UBT3 FAM90A9P-201ENST00000527940 1395 ntBASIC13.91□□□□□ -0.18
DKK4Q9UBT3 FAM90A5P-201ENST00000528738 1395 ntBASIC13.91□□□□□ -0.18
DKK4Q9UBT3 FAM90A14P-201ENST00000530386 1395 ntBASIC13.91□□□□□ -0.18
DKK4Q9UBT3 FAM90A13P-201ENST00000534703 1395 ntBASIC13.91□□□□□ -0.18
DKK4Q9UBT3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 IL9RP3-201ENST00000442856 1674 ntBASIC13.91□□□□□ -0.18
DKK4Q9UBT3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.91□□□□□ -0.18
DKK4Q9UBT3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 ACTBP7-201ENST00000418351 1124 ntBASIC13.9□□□□□ -0.18
DKK4Q9UBT3 RPL35P9-201ENST00000446059 350 ntBASIC13.9□□□□□ -0.18
DKK4Q9UBT3 CR383656.3-201ENST00000551315 183 ntBASIC13.9□□□□□ -0.18
DKK4Q9UBT3 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 AC027601.3-201ENST00000622907 509 ntBASIC13.9□□□□□ -0.18
DKK4Q9UBT3 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.9□□□□□ -0.18
DKK4Q9UBT3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.9□□□□□ -0.18
DKK4Q9UBT3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DKK4Q9UBT3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
DKK4Q9UBT3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 AC006449.5-201ENST00000610658 2098 ntBASIC13.89□□□□□ -0.19
DKK4Q9UBT3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.89□□□□□ -0.19
DKK4Q9UBT3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms