Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 AC069262.1-201ENST00000539058 672 ntBASIC14.42□□□□□ -0.1
VAPAQ9P0L0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 AC092135.3-201ENST00000624151 1846 ntBASIC14.42□□□□□ -0.1
VAPAQ9P0L0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 OR2I1P-209ENST00000641730 5365 ntBASIC14.42□□□□□ -0.1
VAPAQ9P0L0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.42□□□□□ -0.1
VAPAQ9P0L0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 RN7SL618P-201ENST00000477850 296 ntBASIC14.41□□□□□ -0.1
VAPAQ9P0L0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 AL138828.2-201ENST00000615812 383 ntBASIC14.41□□□□□ -0.1
VAPAQ9P0L0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 AC010327.5-201ENST00000586923 3061 ntBASIC14.41□□□□□ -0.1
VAPAQ9P0L0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VAPAQ9P0L0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VAPAQ9P0L0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAPAQ9P0L0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VAPAQ9P0L0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAPAQ9P0L0 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAPAQ9P0L0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
VAPAQ9P0L0 AC055811.4-201ENST00000624039 1754 ntBASIC14.4□□□□□ -0.1
VAPAQ9P0L0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VAPAQ9P0L0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
VAPAQ9P0L0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.4□□□□□ -0.1
VAPAQ9P0L0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAPAQ9P0L0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VAPAQ9P0L0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms