Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 AL353770.1-201ENST00000614915 403 ntBASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 AC011491.1-203ENST00000637688 543 ntBASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 AC006486.2-201ENST00000624246 2199 ntBASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PDLIM7Q9NR12 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDLIM7Q9NR12 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDLIM7Q9NR12 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.83■□□□□ 0.29
PDLIM7Q9NR12 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDLIM7Q9NR12 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 RNMTL1P1-201ENST00000454103 560 ntBASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 WASH3P-207ENST00000560956 1394 ntBASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 AC106820.3-201ENST00000561653 397 ntBASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 RN7SL736P-201ENST00000613111 269 ntBASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM7Q9NR12 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM7Q9NR12 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms