Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MEIS3P1-201ENST00000495167 958 ntBASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 AC135586.1-201ENST00000539323 574 ntBASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 AC092337.1-201ENST00000568699 1129 ntBASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 AL645728.2-202ENST00000641679 227 ntBASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 AC022144.1-201ENST00000602255 1580 ntBASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC68Q9H2F9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 SNX18-202ENST00000343017 3140 ntBASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 CICP14-201ENST00000629111 2732 ntBASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 TSSK5P-201ENST00000423978 907 ntBASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 AC009477.1-201ENST00000452936 217 ntBASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC68Q9H2F9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC68Q9H2F9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms