Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.35■□□□□ 0.05
NOTCH4Q99466 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.35■□□□□ 0.05
NOTCH4Q99466 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.35■□□□□ 0.05
NOTCH4Q99466 AC078991.1-201ENST00000437297 610 ntBASIC15.35■□□□□ 0.05
NOTCH4Q99466 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.35■□□□□ 0.05
NOTCH4Q99466 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.35■□□□□ 0.05
NOTCH4Q99466 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.35■□□□□ 0.05
NOTCH4Q99466 AC133540.1-201ENST00000620845 1019 ntBASIC15.35■□□□□ 0.05
NOTCH4Q99466 AC011491.1-203ENST00000637688 543 ntBASIC15.35■□□□□ 0.05
NOTCH4Q99466 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NOTCH4Q99466 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.35■□□□□ 0.05
NOTCH4Q99466 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.35■□□□□ 0.05
NOTCH4Q99466 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.35■□□□□ 0.05
NOTCH4Q99466 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NOTCH4Q99466 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NOTCH4Q99466 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 AC090857.1-201ENST00000527400 390 ntBASIC15.34■□□□□ 0.05
NOTCH4Q99466 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 PPT1-215ENST00000641471 2368 ntBASIC15.34■□□□□ 0.05
NOTCH4Q99466 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 RNA5SP359-201ENST00000364838 113 ntBASIC15.34■□□□□ 0.05
NOTCH4Q99466 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 TMCO5B-205ENST00000530020 894 ntBASIC15.34■□□□□ 0.05
NOTCH4Q99466 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 MIR3188-201ENST00000583494 85 ntBASIC15.34■□□□□ 0.05
NOTCH4Q99466 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.34■□□□□ 0.05
NOTCH4Q99466 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NOTCH4Q99466 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NOTCH4Q99466 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NOTCH4Q99466 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NOTCH4Q99466 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NOTCH4Q99466 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
NOTCH4Q99466 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NOTCH4Q99466 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.33■□□□□ 0.04
NOTCH4Q99466 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.33■□□□□ 0.04
NOTCH4Q99466 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NOTCH4Q99466 ST13P19-201ENST00000442505 1124 ntBASIC15.33■□□□□ 0.04
NOTCH4Q99466 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.33■□□□□ 0.04
NOTCH4Q99466 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NOTCH4Q99466 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.33■□□□□ 0.04
NOTCH4Q99466 AC135983.4-201ENST00000564116 1262 ntBASIC15.33■□□□□ 0.04
NOTCH4Q99466 AC009884.2-201ENST00000603110 324 ntBASIC15.33■□□□□ 0.04
NOTCH4Q99466 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NOTCH4Q99466 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NOTCH4Q99466 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
NOTCH4Q99466 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms