Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.49□□□□□ -0.09
BBS4Q96RK4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 LINC01101-201ENST00000622953 1884 ntBASIC14.49□□□□□ -0.09
BBS4Q96RK4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 MIR770-201ENST00000390219 98 ntBASIC14.49□□□□□ -0.09
BBS4Q96RK4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 RN7SL399P-201ENST00000471648 279 ntBASIC14.49□□□□□ -0.09
BBS4Q96RK4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 AC027796.2-201ENST00000575326 344 ntBASIC14.49□□□□□ -0.09
BBS4Q96RK4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 AL391069.4-201ENST00000609583 481 ntBASIC14.49□□□□□ -0.09
BBS4Q96RK4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
BBS4Q96RK4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.49□□□□□ -0.09
BBS4Q96RK4 ST20-AS1-201ENST00000560255 4223 ntBASIC14.49□□□□□ -0.09
BBS4Q96RK4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 REXO1L2P-201ENST00000425429 2069 ntBASIC14.48□□□□□ -0.09
BBS4Q96RK4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 AC104457.1-201ENST00000401024 814 ntBASIC14.48□□□□□ -0.09
BBS4Q96RK4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 GNAQP1-201ENST00000444815 1067 ntBASIC14.48□□□□□ -0.09
BBS4Q96RK4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 RPL13AP25-201ENST00000484130 612 ntBASIC14.48□□□□□ -0.09
BBS4Q96RK4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 AL049840.4-201ENST00000602422 811 ntBASIC14.48□□□□□ -0.09
BBS4Q96RK4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
BBS4Q96RK4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BBS4Q96RK4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 204.3 ms