Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 SOCS2P1-201ENST00000417727 557 ntBASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 BCRP1-201ENST00000444246 691 ntBASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 AC124283.3-201ENST00000570869 594 ntBASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 AL096865.1-201ENST00000606796 927 ntBASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 MIR8072-201ENST00000614241 80 ntBASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 BX539320.1-201ENST00000623759 877 ntBASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 AC007541.1-201ENST00000570282 1469 ntBASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 AC106881.1-201ENST00000605849 3329 ntBASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MS4A4EQ96PG1 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 HLA-K-203ENST00000430151 1046 ntBASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 AC092552.1-201ENST00000547243 906 ntBASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 SPCS2P1-201ENST00000561636 679 ntBASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 AC097376.2-205ENST00000610159 5334 ntBASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MS4A4EQ96PG1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 CICP14-201ENST00000629111 2732 ntBASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
MS4A4EQ96PG1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms