Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 MEIS3P1-201ENST00000495167 958 ntBASIC14.47□□□□□ -0.09
COL21A1Q96P44 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 DOC2GP-202ENST00000514950 1163 ntBASIC14.47□□□□□ -0.09
COL21A1Q96P44 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 MIR4745-201ENST00000577608 62 ntBASIC14.47□□□□□ -0.09
COL21A1Q96P44 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 C8orf49-201ENST00000525043 1968 ntBASIC14.47□□□□□ -0.09
COL21A1Q96P44 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL21A1Q96P44 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.47□□□□□ -0.09
COL21A1Q96P44 WASH3P-207ENST00000560956 1394 ntBASIC14.47□□□□□ -0.09
COL21A1Q96P44 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 TOMM22P5-201ENST00000416399 439 ntBASIC14.46□□□□□ -0.09
COL21A1Q96P44 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 SERBP1P5-201ENST00000510079 1181 ntBASIC14.46□□□□□ -0.09
COL21A1Q96P44 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL21A1Q96P44 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.46□□□□□ -0.09
COL21A1Q96P44 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL21A1Q96P44 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL21A1Q96P44 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL21A1Q96P44 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.1
COL21A1Q96P44 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
COL21A1Q96P44 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL21A1Q96P44 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
COL21A1Q96P44 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL21A1Q96P44 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL21A1Q96P44 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
COL21A1Q96P44 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.46□□□□□ -0.1
COL21A1Q96P44 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
COL21A1Q96P44 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 AC138969.3-201ENST00000546612 1459 ntBASIC14.45□□□□□ -0.1
COL21A1Q96P44 AC138932.2-201ENST00000548268 1459 ntBASIC14.45□□□□□ -0.1
COL21A1Q96P44 AC126755.4-201ENST00000549796 1459 ntBASIC14.45□□□□□ -0.1
COL21A1Q96P44 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 SPDYE19P-201ENST00000338590 713 ntBASIC14.45□□□□□ -0.1
COL21A1Q96P44 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.45□□□□□ -0.1
COL21A1Q96P44 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL21A1Q96P44 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms