Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.3■□□□□ 0.84
CFAP53Q96M91 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC20.3■□□□□ 0.84
CFAP53Q96M91 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.3■□□□□ 0.84
CFAP53Q96M91 AC006453.4-201ENST00000636949 1252 ntBASIC20.3■□□□□ 0.84
CFAP53Q96M91 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP53Q96M91 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP53Q96M91 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC20.3■□□□□ 0.84
CFAP53Q96M91 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CFAP53Q96M91 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP53Q96M91 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP53Q96M91 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP53Q96M91 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP53Q96M91 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP53Q96M91 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP53Q96M91 AC104640.1-201ENST00000562617 2109 ntBASIC20.3■□□□□ 0.84
CFAP53Q96M91 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC20.3■□□□□ 0.84
CFAP53Q96M91 AC091951.1-201ENST00000512854 2465 ntBASIC20.3■□□□□ 0.84
CFAP53Q96M91 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP53Q96M91 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CFAP53Q96M91 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC20.3■□□□□ 0.84
CFAP53Q96M91 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP53Q96M91 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP53Q96M91 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CFAP53Q96M91 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CFAP53Q96M91 ZEB1-AS1-208ENST00000607166 2503 ntBASIC20.29■□□□□ 0.84
CFAP53Q96M91 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP53Q96M91 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP53Q96M91 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC20.29■□□□□ 0.84
CFAP53Q96M91 SLC9A7P1-201ENST00000554295 3311 ntBASIC20.29■□□□□ 0.84
CFAP53Q96M91 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CFAP53Q96M91 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CFAP53Q96M91 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP53Q96M91 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP53Q96M91 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP53Q96M91 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.29■□□□□ 0.84
CFAP53Q96M91 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP53Q96M91 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.29■□□□□ 0.84
CFAP53Q96M91 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC20.29■□□□□ 0.84
CFAP53Q96M91 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.29■□□□□ 0.84
CFAP53Q96M91 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC20.29■□□□□ 0.84
CFAP53Q96M91 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CFAP53Q96M91 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP53Q96M91 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC20.29■□□□□ 0.84
CFAP53Q96M91 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC20.29■□□□□ 0.84
CFAP53Q96M91 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.29■□□□□ 0.84
CFAP53Q96M91 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC20.29■□□□□ 0.84
CFAP53Q96M91 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP53Q96M91 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP53Q96M91 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CFAP53Q96M91 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CFAP53Q96M91 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
CFAP53Q96M91 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CFAP53Q96M91 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CFAP53Q96M91 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CFAP53Q96M91 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC20.28■□□□□ 0.84
CFAP53Q96M91 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CFAP53Q96M91 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.28■□□□□ 0.84
CFAP53Q96M91 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CFAP53Q96M91 AC099336.1-201ENST00000417053 1171 ntBASIC20.28■□□□□ 0.84
CFAP53Q96M91 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC20.28■□□□□ 0.84
CFAP53Q96M91 AC026954.1-201ENST00000429771 1293 ntBASIC20.28■□□□□ 0.84
CFAP53Q96M91 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CFAP53Q96M91 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CFAP53Q96M91 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC20.28■□□□□ 0.84
CFAP53Q96M91 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC20.28■□□□□ 0.84
CFAP53Q96M91 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC20.28■□□□□ 0.84
CFAP53Q96M91 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CFAP53Q96M91 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CFAP53Q96M91 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC20.28■□□□□ 0.84
CFAP53Q96M91 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CFAP53Q96M91 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CFAP53Q96M91 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CFAP53Q96M91 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC20.27■□□□□ 0.84
CFAP53Q96M91 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CFAP53Q96M91 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 HLA-V-201ENST00000429037 534 ntBASIC20.27■□□□□ 0.84
CFAP53Q96M91 CSF2RBP1-201ENST00000447905 391 ntBASIC20.27■□□□□ 0.84
CFAP53Q96M91 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC20.27■□□□□ 0.84
CFAP53Q96M91 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.27■□□□□ 0.84
CFAP53Q96M91 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.27■□□□□ 0.84
CFAP53Q96M91 AC004466.1-201ENST00000599515 1080 ntBASIC20.27■□□□□ 0.84
CFAP53Q96M91 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC20.27■□□□□ 0.84
CFAP53Q96M91 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CFAP53Q96M91 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CFAP53Q96M91 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CFAP53Q96M91 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CFAP53Q96M91 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms