Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.71□□□□□ -0.06
VPS33AQ96AX1 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
VPS33AQ96AX1 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
VPS33AQ96AX1 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS33AQ96AX1 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.06
VPS33AQ96AX1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.71□□□□□ -0.06
VPS33AQ96AX1 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS33AQ96AX1 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AC087386.2-201ENST00000623212 4637 ntBASIC14.7□□□□□ -0.06
VPS33AQ96AX1 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AC079781.5-202ENST00000641784 3743 ntBASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AL079307.3-201ENST00000556114 283 ntBASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AC026150.2-201ENST00000564693 1156 ntBASIC14.7□□□□□ -0.06
VPS33AQ96AX1 MIR4453-201ENST00000584019 89 ntBASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AC025181.2-201ENST00000606994 802 ntBASIC14.7□□□□□ -0.06
VPS33AQ96AX1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 AL035456.1-201ENST00000456064 1369 ntBASIC14.7□□□□□ -0.06
VPS33AQ96AX1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS33AQ96AX1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 AL022342.1-201ENST00000400363 863 ntBASIC14.69□□□□□ -0.06
VPS33AQ96AX1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS33AQ96AX1 AF228730.6-201ENST00000641497 218 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms