Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HPS3Q969F9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HPS3Q969F9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HPS3Q969F9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.87■□□□□ 0.29
HPS3Q969F9 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS3Q969F9 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.87■□□□□ 0.29
HPS3Q969F9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HPS3Q969F9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HPS3Q969F9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.86■□□□□ 0.29
HPS3Q969F9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.86■□□□□ 0.29
HPS3Q969F9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HPS3Q969F9 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HPS3Q969F9 AC097359.2-201ENST00000604992 2389 ntBASIC16.86■□□□□ 0.29
HPS3Q969F9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
HPS3Q969F9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
HPS3Q969F9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.86■□□□□ 0.29
HPS3Q969F9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
HPS3Q969F9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.86■□□□□ 0.29
HPS3Q969F9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.86■□□□□ 0.29
HPS3Q969F9 AC140912.1-201ENST00000577171 1054 ntBASIC16.86■□□□□ 0.29
HPS3Q969F9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.86■□□□□ 0.29
HPS3Q969F9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 BX539320.1-201ENST00000623759 877 ntBASIC16.86■□□□□ 0.29
HPS3Q969F9 MSTO2P-201ENST00000314835 1709 ntBASIC16.86■□□□□ 0.29
HPS3Q969F9 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HPS3Q969F9 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.86■□□□□ 0.29
HPS3Q969F9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HPS3Q969F9 AC068587.6-202ENST00000641839 5619 ntBASIC16.85■□□□□ 0.29
HPS3Q969F9 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
HPS3Q969F9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS3Q969F9 AC232323.1-201ENST00000540724 2099 ntBASIC16.85■□□□□ 0.29
HPS3Q969F9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 AC023090.2-201ENST00000625182 2110 ntBASIC16.85■□□□□ 0.29
HPS3Q969F9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.85■□□□□ 0.29
HPS3Q969F9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HPS3Q969F9 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS3Q969F9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HPS3Q969F9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.85■□□□□ 0.29
HPS3Q969F9 TP53TG3HP-202ENST00000569755 579 ntBASIC16.85■□□□□ 0.29
HPS3Q969F9 CLUHP6-201ENST00000580789 941 ntBASIC16.85■□□□□ 0.29
HPS3Q969F9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS3Q969F9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS3Q969F9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 AC018442.1-201ENST00000421439 2061 ntBASIC16.85■□□□□ 0.29
HPS3Q969F9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HPS3Q969F9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.85■□□□□ 0.29
HPS3Q969F9 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.85■□□□□ 0.29
HPS3Q969F9 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HPS3Q969F9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HPS3Q969F9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HPS3Q969F9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.84■□□□□ 0.29
HPS3Q969F9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS3Q969F9 AL009178.2-201ENST00000597278 2719 ntBASIC16.84■□□□□ 0.29
HPS3Q969F9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS3Q969F9 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.84■□□□□ 0.29
HPS3Q969F9 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.84■□□□□ 0.29
HPS3Q969F9 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
HPS3Q969F9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
HPS3Q969F9 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS3Q969F9 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.84■□□□□ 0.29
HPS3Q969F9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS3Q969F9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS3Q969F9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.84■□□□□ 0.29
HPS3Q969F9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
HPS3Q969F9 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS3Q969F9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS3Q969F9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS3Q969F9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS3Q969F9 AC005912.2-201ENST00000619492 2400 ntBASIC16.84■□□□□ 0.29
HPS3Q969F9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HPS3Q969F9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS3Q969F9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
HPS3Q969F9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.84■□□□□ 0.29
HPS3Q969F9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HPS3Q969F9 SOCS2P1-201ENST00000417727 557 ntBASIC16.84■□□□□ 0.29
HPS3Q969F9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.84■□□□□ 0.29
HPS3Q969F9 CRB3P1-201ENST00000449338 276 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms