Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 AL162727.3-201ENST00000635661 2787 ntBASIC17■□□□□ 0.31
ATP6V0A1Q93050 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17■□□□□ 0.31
ATP6V0A1Q93050 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP6V0A1Q93050 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 AL157414.3-201ENST00000624276 1954 ntBASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 MTX1P1-201ENST00000440904 838 ntBASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 AL591846.1-201ENST00000451736 433 ntBASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 DUX4L47-201ENST00000566374 394 ntBASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 EEF1DP1-201ENST00000585891 896 ntBASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 AC084346.2-201ENST00000607097 949 ntBASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 ENPP7P14-201ENST00000621765 1040 ntBASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 AC055811.4-201ENST00000624039 1754 ntBASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP6V0A1Q93050 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 MROH4P-201ENST00000431302 1578 ntBASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 AC005695.3-201ENST00000614522 232 ntBASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ATP6V0A1Q93050 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATP6V0A1Q93050 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms