Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AC003686.1-201ENST00000550956 1034 ntBASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CASKIN1Q8WXD9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 NCR3-202ENST00000376071 541 ntTSL 5 BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 RN7SL258P-201ENST00000478664 300 ntBASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 KHSRPP1-201ENST00000427983 1768 ntBASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 AC009093.10-201ENST00000641956 1442 ntBASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CASKIN1Q8WXD9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 AC069218.1-201ENST00000435269 762 ntBASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 RN7SL67P-201ENST00000492147 296 ntBASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 AL109837.1-201ENST00000603272 613 ntBASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 TBC1D3J-201ENST00000620719 1426 ntBASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 RAN-210ENST00000541630 1475 ntTSL 2 BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CASKIN1Q8WXD9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 NDUFS6P1-201ENST00000485187 316 ntBASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 PHBP15-201ENST00000574228 665 ntBASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 MIR3188-201ENST00000583494 85 ntBASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 AC092299.1-201ENST00000632679 757 ntBASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC23.08■■□□□ 1.28
CASKIN1Q8WXD9 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 R3HDM2P2-201ENST00000401880 2116 ntBASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 AC139712.1-201ENST00000378256 1875 ntBASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CASKIN1Q8WXD9 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms