Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 FO393414.2-201ENST00000405153 598 ntBASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 AL079307.3-201ENST00000556114 283 ntBASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 AC011467.4-201ENST00000594891 528 ntBASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 AL589739.1-201ENST00000607720 493 ntBASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RTN4IP1Q8WWV3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
RTN4IP1Q8WWV3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
RTN4IP1Q8WWV3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
RTN4IP1Q8WWV3 AL607033.1-201ENST00000623900 1599 ntBASIC12.9□□□□□ -0.35
RTN4IP1Q8WWV3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
RTN4IP1Q8WWV3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
RTN4IP1Q8WWV3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
RTN4IP1Q8WWV3 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 TUBB3P1-201ENST00000405796 1332 ntBASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 AZGP1P1-201ENST00000411909 902 ntBASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 AC125807.1-201ENST00000483097 614 ntBASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 AC015911.4-201ENST00000588022 1070 ntBASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 MTHFR-210ENST00000641407 2387 ntBASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RTN4IP1Q8WWV3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms