Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC17A8Q8NDX2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC17A8Q8NDX2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC17A8Q8NDX2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC17A8Q8NDX2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC17A8Q8NDX2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC17A8Q8NDX2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SLC17A8Q8NDX2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC17A8Q8NDX2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
SLC17A8Q8NDX2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 FGFR3P5-201ENST00000564496 886 ntBASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 AC104982.3-201ENST00000581995 514 ntBASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 AC025181.2-201ENST00000606994 802 ntBASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SLC17A8Q8NDX2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 AC126365.1-201ENST00000578585 1514 ntBASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 AC005695.3-201ENST00000614522 232 ntBASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 AP001505.2-201ENST00000616815 443 ntBASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 AC009090.5-201ENST00000624886 2285 ntBASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC17A8Q8NDX2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 CYP46A4P-201ENST00000414953 267 ntBASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 SOCS2P1-201ENST00000417727 557 ntBASIC17.12■□□□□ 0.33
SLC17A8Q8NDX2 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms