Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 MIR658-201ENST00000385210 100 ntBASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 RNA5SP486-201ENST00000515961 83 ntBASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 MIR4259-201ENST00000584466 101 ntBASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 MIR6805-201ENST00000615055 62 ntBASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 AC138951.2-201ENST00000623455 1161 ntBASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
C9orf40Q8IXQ3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 AC023090.2-201ENST00000625182 2110 ntBASIC14□□□□□ -0.17
C9orf40Q8IXQ3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 TPM3P8-201ENST00000330554 643 ntBASIC14□□□□□ -0.17
C9orf40Q8IXQ3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 POM121L8P-201ENST00000417732 1281 ntBASIC14□□□□□ -0.17
C9orf40Q8IXQ3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 POM121L9P-203ENST00000441984 1285 ntBASIC14□□□□□ -0.17
C9orf40Q8IXQ3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 FO681548.1-201ENST00000455617 1132 ntBASIC14□□□□□ -0.17
C9orf40Q8IXQ3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 RHOXF1P1-202ENST00000635473 501 ntBASIC14□□□□□ -0.17
C9orf40Q8IXQ3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
C9orf40Q8IXQ3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.99□□□□□ -0.17
C9orf40Q8IXQ3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.99□□□□□ -0.17
C9orf40Q8IXQ3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
C9orf40Q8IXQ3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
C9orf40Q8IXQ3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
C9orf40Q8IXQ3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms