Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 AC152010.1-201ENST00000415779 2006 ntBASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM42Q8IWZ5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 AC007787.1-201ENST00000588095 1583 ntBASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 FO393414.2-201ENST00000405153 598 ntBASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 AL671277.1-201ENST00000429656 993 ntBASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 RN7SL589P-201ENST00000481268 310 ntBASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 AC005829.1-201ENST00000570002 483 ntBASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM42Q8IWZ5 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 AL928921.2-201ENST00000641325 2442 ntBASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 MIR346-201ENST00000362234 95 ntBASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 AP000842.3-202ENST00000569238 1080 ntBASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.27■□□□□ 0.04
TRIM42Q8IWZ5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms