Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00346Q8IVM7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 MEIS3P1-201ENST00000495167 958 ntBASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 CLK3P2-201ENST00000427566 1453 ntBASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 AC022144.1-201ENST00000602255 1580 ntBASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00346Q8IVM7 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 AC104794.3-201ENST00000566840 1248 ntBASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 SAMD11P1-201ENST00000571429 661 ntBASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 AL645728.2-202ENST00000641679 227 ntBASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 AC026748.1-201ENST00000624349 3251 ntBASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LINC00346Q8IVM7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms