Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 TLE1P1-201ENST00000422965 589 ntBASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 PDIA3P2-201ENST00000428073 158 ntBASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 KLF2P1-201ENST00000447438 1042 ntBASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 AC116345.2-201ENST00000512837 523 ntBASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 AC009884.2-201ENST00000603110 324 ntBASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 AL391005.1-201ENST00000623953 2435 ntBASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPAS4Q8IUM7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 U62317.3-201ENST00000608319 855 ntBASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 AC006453.1-201ENST00000636037 1257 ntBASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 AC006480.2-201ENST00000609770 1337 ntBASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms