Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.48■□□□□ 0.07
PACS2Q86VP3 AC005412.3-201ENST00000580309 715 ntBASIC15.48■□□□□ 0.07
PACS2Q86VP3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.48■□□□□ 0.07
PACS2Q86VP3 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.48■□□□□ 0.07
PACS2Q86VP3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.48■□□□□ 0.07
PACS2Q86VP3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PACS2Q86VP3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PACS2Q86VP3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PACS2Q86VP3 KRT8P39-201ENST00000396270 1433 ntBASIC15.48■□□□□ 0.07
PACS2Q86VP3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PACS2Q86VP3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PACS2Q86VP3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PACS2Q86VP3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PACS2Q86VP3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.48■□□□□ 0.07
PACS2Q86VP3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PACS2Q86VP3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PACS2Q86VP3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PACS2Q86VP3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PACS2Q86VP3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PACS2Q86VP3 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC15.48■□□□□ 0.07
PACS2Q86VP3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PACS2Q86VP3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PACS2Q86VP3 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PACS2Q86VP3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 AC068760.1-201ENST00000493579 1953 ntBASIC15.47■□□□□ 0.07
PACS2Q86VP3 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 KRT19P2-202ENST00000557173 1012 ntBASIC15.47■□□□□ 0.07
PACS2Q86VP3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 AC025580.3-201ENST00000617932 1424 ntBASIC15.47■□□□□ 0.07
PACS2Q86VP3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 TOP3BP1-201ENST00000420768 1380 ntBASIC15.47■□□□□ 0.07
PACS2Q86VP3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 DNM1P41-201ENST00000623634 3350 ntBASIC15.47■□□□□ 0.07
PACS2Q86VP3 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC15.47■□□□□ 0.07
PACS2Q86VP3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PACS2Q86VP3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PACS2Q86VP3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PACS2Q86VP3 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.46■□□□□ 0.07
PACS2Q86VP3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PACS2Q86VP3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PACS2Q86VP3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PACS2Q86VP3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PACS2Q86VP3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PACS2Q86VP3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PACS2Q86VP3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PACS2Q86VP3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 YBX2P1-201ENST00000394192 760 ntBASIC15.46■□□□□ 0.07
PACS2Q86VP3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 AC107918.2-201ENST00000530817 355 ntBASIC15.46■□□□□ 0.07
PACS2Q86VP3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 PDPK2P-202ENST00000562415 1191 ntBASIC15.46■□□□□ 0.07
PACS2Q86VP3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.46■□□□□ 0.07
PACS2Q86VP3 AL137246.1-201ENST00000607072 977 ntBASIC15.46■□□□□ 0.07
PACS2Q86VP3 ACTL9-202ENST00000612068 1252 ntBASIC15.46■□□□□ 0.07
PACS2Q86VP3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms