Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CASC4Q6P4E1 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 REXO1L4P-201ENST00000605109 1937 ntBASIC15.61■□□□□ 0.09
CASC4Q6P4E1 AC012508.2-201ENST00000567613 1472 ntBASIC15.61■□□□□ 0.09
CASC4Q6P4E1 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.61■□□□□ 0.09
CASC4Q6P4E1 FAM86GP-201ENST00000448322 971 ntBASIC15.61■□□□□ 0.09
CASC4Q6P4E1 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.61■□□□□ 0.09
CASC4Q6P4E1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 AC140878.1-201ENST00000565277 250 ntBASIC15.61■□□□□ 0.09
CASC4Q6P4E1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 AC026748.1-201ENST00000624349 3251 ntBASIC15.61■□□□□ 0.09
CASC4Q6P4E1 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CASC4Q6P4E1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 AC138969.3-201ENST00000546612 1459 ntBASIC15.6■□□□□ 0.09
CASC4Q6P4E1 AC138932.2-201ENST00000548268 1459 ntBASIC15.6■□□□□ 0.09
CASC4Q6P4E1 AC126755.4-201ENST00000549796 1459 ntBASIC15.6■□□□□ 0.09
CASC4Q6P4E1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 TOMM22P5-201ENST00000416399 439 ntBASIC15.6■□□□□ 0.09
CASC4Q6P4E1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 TIMM17BP1-201ENST00000545713 516 ntBASIC15.6■□□□□ 0.09
CASC4Q6P4E1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 AC044860.1-202ENST00000559481 777 ntBASIC15.6■□□□□ 0.09
CASC4Q6P4E1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms