Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 AC023024.2-201ENST00000623561 1993 ntBASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 ACKR1-201ENST00000368121 1240 ntBASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 AC106886.1-201ENST00000568660 600 ntBASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 MIR5189-201ENST00000577370 114 ntBASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC39BQ5VTQ0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.89■□□□□ 0.14
TTC39BQ5VTQ0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 NUS1P3-201ENST00000423502 862 ntBASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 AC004066.1-201ENST00000502488 802 ntBASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 PTP4A1P2-201ENST00000546033 454 ntBASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC39BQ5VTQ0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 MROH4P-201ENST00000431302 1578 ntBASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 AC023908.3-201ENST00000564211 3047 ntBASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TTC39BQ5VTQ0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms