Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.93□□□□□ -0.34
LRRK2Q5S007 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 AC006058.4-201ENST00000624016 1670 ntBASIC12.93□□□□□ -0.34
LRRK2Q5S007 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 AC013726.1-201ENST00000563747 2285 ntBASIC12.93□□□□□ -0.34
LRRK2Q5S007 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 RN7SL173P-201ENST00000461853 292 ntBASIC12.93□□□□□ -0.34
LRRK2Q5S007 AC090820.1-201ENST00000519722 591 ntBASIC12.93□□□□□ -0.34
LRRK2Q5S007 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LRRK2Q5S007 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LRRK2Q5S007 AL138725.1-201ENST00000407347 1314 ntBASIC12.92□□□□□ -0.34
LRRK2Q5S007 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 AC007292.2-201ENST00000593524 1812 ntBASIC12.92□□□□□ -0.34
LRRK2Q5S007 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 KRT8P30-201ENST00000432100 650 ntBASIC12.92□□□□□ -0.34
LRRK2Q5S007 AL157407.1-201ENST00000435784 904 ntBASIC12.92□□□□□ -0.34
LRRK2Q5S007 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 RNA5SP417-201ENST00000516459 108 ntBASIC12.92□□□□□ -0.34
LRRK2Q5S007 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 AC020904.3-201ENST00000624199 442 ntBASIC12.92□□□□□ -0.34
LRRK2Q5S007 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 AL137783.1-201ENST00000623494 1896 ntBASIC12.92□□□□□ -0.34
LRRK2Q5S007 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.92□□□□□ -0.34
LRRK2Q5S007 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 AL451000.1-201ENST00000451300 1186 ntBASIC12.92□□□□□ -0.34
LRRK2Q5S007 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 AL590235.1-201ENST00000564650 861 ntBASIC12.92□□□□□ -0.34
LRRK2Q5S007 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRK2Q5S007 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRK2Q5S007 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms