Protein–RNA interactions for Protein: Q3B726

TWISTNB, DNA-directed RNA polymerase I subunit RPA43, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNBQ3B726 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TWISTNBQ3B726 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 AC099336.1-201ENST00000417053 1171 ntBASIC19.44■□□□□ 0.7
TWISTNBQ3B726 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 KRT223P-202ENST00000449164 1292 ntBASIC19.44■□□□□ 0.7
TWISTNBQ3B726 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.44■□□□□ 0.7
TWISTNBQ3B726 AC133552.6-201ENST00000613406 534 ntBASIC19.44■□□□□ 0.7
TWISTNBQ3B726 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC19.44■□□□□ 0.7
TWISTNBQ3B726 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 CD8B2-202ENST00000417670 633 ntBASIC19.43■□□□□ 0.7
TWISTNBQ3B726 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 AC006058.4-201ENST00000624016 1670 ntBASIC19.43■□□□□ 0.7
TWISTNBQ3B726 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TWISTNBQ3B726 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms