Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AL139094.1-201ENST00000405549 1188 ntBASIC17.78■□□□□ 0.44
IRX3P78415 MIR663B-201ENST00000408361 115 ntBASIC17.78■□□□□ 0.44
IRX3P78415 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.78■□□□□ 0.44
IRX3P78415 AC005077.2-201ENST00000449786 690 ntBASIC17.78■□□□□ 0.44
IRX3P78415 RNA5SP423-201ENST00000517127 109 ntBASIC17.78■□□□□ 0.44
IRX3P78415 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.78■□□□□ 0.44
IRX3P78415 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.78■□□□□ 0.44
IRX3P78415 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
IRX3P78415 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.78■□□□□ 0.44
IRX3P78415 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 AC104640.1-201ENST00000562617 2109 ntBASIC17.78■□□□□ 0.44
IRX3P78415 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX3P78415 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
IRX3P78415 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
IRX3P78415 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
IRX3P78415 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX3P78415 AC069224.1-201ENST00000566372 1715 ntBASIC17.78■□□□□ 0.44
IRX3P78415 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.78■□□□□ 0.44
IRX3P78415 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IRX3P78415 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
IRX3P78415 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IRX3P78415 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IRX3P78415 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX3P78415 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
IRX3P78415 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
IRX3P78415 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX3P78415 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX3P78415 AC079178.1-201ENST00000420915 656 ntBASIC17.77■□□□□ 0.44
IRX3P78415 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.77■□□□□ 0.44
IRX3P78415 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.77■□□□□ 0.44
IRX3P78415 POM121L10P-201ENST00000436994 1285 ntBASIC17.77■□□□□ 0.44
IRX3P78415 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.77■□□□□ 0.44
IRX3P78415 BX284668.4-201ENST00000453917 508 ntBASIC17.77■□□□□ 0.44
IRX3P78415 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.77■□□□□ 0.44
IRX3P78415 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.77■□□□□ 0.44
IRX3P78415 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
IRX3P78415 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.77■□□□□ 0.44
IRX3P78415 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
IRX3P78415 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.77■□□□□ 0.44
IRX3P78415 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.77■□□□□ 0.44
IRX3P78415 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.77■□□□□ 0.44
IRX3P78415 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
IRX3P78415 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX3P78415 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX3P78415 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
IRX3P78415 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IRX3P78415 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
IRX3P78415 AL023775.1-201ENST00000454907 1746 ntBASIC17.77■□□□□ 0.44
IRX3P78415 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
IRX3P78415 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IRX3P78415 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
IRX3P78415 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
IRX3P78415 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
IRX3P78415 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
IRX3P78415 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IRX3P78415 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.77■□□□□ 0.43
IRX3P78415 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IRX3P78415 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IRX3P78415 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
IRX3P78415 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.76■□□□□ 0.43
IRX3P78415 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
IRX3P78415 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.76■□□□□ 0.43
IRX3P78415 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
IRX3P78415 AC026691.1-201ENST00000602502 2017 ntBASIC17.76■□□□□ 0.43
IRX3P78415 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
IRX3P78415 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.76■□□□□ 0.43
IRX3P78415 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
IRX3P78415 AL645937.2-201ENST00000396808 931 ntBASIC17.76■□□□□ 0.43
IRX3P78415 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.76■□□□□ 0.43
IRX3P78415 FAM8A4P-201ENST00000435433 1213 ntBASIC17.76■□□□□ 0.43
IRX3P78415 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 HSPB1P2-201ENST00000448722 546 ntBASIC17.76■□□□□ 0.43
IRX3P78415 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.76■□□□□ 0.43
IRX3P78415 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.76■□□□□ 0.43
IRX3P78415 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.76■□□□□ 0.43
IRX3P78415 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.76■□□□□ 0.43
IRX3P78415 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.76■□□□□ 0.43
IRX3P78415 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
IRX3P78415 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 AC018735.1-201ENST00000437208 1502 ntBASIC17.76■□□□□ 0.43
IRX3P78415 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
IRX3P78415 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
IRX3P78415 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
IRX3P78415 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms