Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.41□□□□□ -0.1
RAE1P78406 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RAE1P78406 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RAE1P78406 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RAE1P78406 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.41□□□□□ -0.1
RAE1P78406 MYCLP2-201ENST00000449268 967 ntBASIC14.41□□□□□ -0.1
RAE1P78406 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.41□□□□□ -0.1
RAE1P78406 ELK1P1-201ENST00000485699 580 ntBASIC14.41□□□□□ -0.1
RAE1P78406 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RAE1P78406 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.41□□□□□ -0.1
RAE1P78406 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
RAE1P78406 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.41□□□□□ -0.1
RAE1P78406 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.41□□□□□ -0.1
RAE1P78406 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.41□□□□□ -0.1
RAE1P78406 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.41□□□□□ -0.1
RAE1P78406 LINC02560-201ENST00000596379 459 ntBASIC14.41□□□□□ -0.1
RAE1P78406 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RAE1P78406 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.41□□□□□ -0.1
RAE1P78406 AL391825.1-201ENST00000457671 1364 ntBASIC14.41□□□□□ -0.1
RAE1P78406 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.41□□□□□ -0.1
RAE1P78406 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.41□□□□□ -0.1
RAE1P78406 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAE1P78406 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.41□□□□□ -0.1
RAE1P78406 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RAE1P78406 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.41□□□□□ -0.1
RAE1P78406 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.41□□□□□ -0.1
RAE1P78406 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
RAE1P78406 INTS4P1-203ENST00000641008 3683 ntBASIC14.41□□□□□ -0.1
RAE1P78406 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAE1P78406 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.41□□□□□ -0.1
RAE1P78406 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RAE1P78406 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.4□□□□□ -0.1
RAE1P78406 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.4□□□□□ -0.1
RAE1P78406 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.4□□□□□ -0.1
RAE1P78406 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.4□□□□□ -0.1
RAE1P78406 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.4□□□□□ -0.1
RAE1P78406 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.4□□□□□ -0.1
RAE1P78406 SOCS2P1-201ENST00000417727 557 ntBASIC14.4□□□□□ -0.1
RAE1P78406 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.4□□□□□ -0.1
RAE1P78406 BCRP1-201ENST00000444246 691 ntBASIC14.4□□□□□ -0.1
RAE1P78406 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.4□□□□□ -0.1
RAE1P78406 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.4□□□□□ -0.1
RAE1P78406 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.4□□□□□ -0.1
RAE1P78406 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.4□□□□□ -0.1
RAE1P78406 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 RN7SL204P-201ENST00000582831 262 ntBASIC14.4□□□□□ -0.1
RAE1P78406 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.4□□□□□ -0.1
RAE1P78406 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.4□□□□□ -0.1
RAE1P78406 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.4□□□□□ -0.1
RAE1P78406 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
RAE1P78406 AC005252.2-201ENST00000624630 1141 ntBASIC14.4□□□□□ -0.1
RAE1P78406 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.4□□□□□ -0.1
RAE1P78406 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAE1P78406 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.4□□□□□ -0.1
RAE1P78406 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAE1P78406 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms